BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024E03SP1|AL428223
(538 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig901 1059 0.0
>3x_Contig901
Length = 2854
Score = 1059 bits (532), Expect = 0.0
Identities = 535/538 (99%)
Strand = Plus / Plus
Query: 1 tatcttcgaacmaatgtgcttggaaggaaacgagaaacaatagagcaagaagtggtagat 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 tatcttcgaaccaatgtgcttggaaggaaacgagaaacaatagagcaagaagtggtagat 1982
Query: 61 gaggaagaagtgatggaaattagaacttcaaatamagggctgattactgaaaccttggtg 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1983 gaggaagaagtgatggaaattagaacttcaaatacagggctgattactgaaaccttggtg 2042
Query: 121 gaaagggaagagttaataaatgaatgtctggagctttatgaaaaggctccagagaaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 gaaagggaagagttaataaatgaatgtctggagctttatgaaaaggctccagagaaattc 2102
Query: 181 aaccatttgcagaaggattctcataagatgttccttgaatattggttaaataatccatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 aaccatttgcagaaggattctcataagatgttccttgaatattggttaaataatccatta 2162
Query: 241 ccttcgggattcaaatcactcgatgcctctcagccatggctgttgtactggattggcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 ccttcgggattcaaatcactcgatgcctctcagccatggctgttgtactggattggcaat 2222
Query: 301 gccttcaaaacaatgaatcccacttggcttacgaacgattatcagaagcgtattttggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 gccttcaaaacaatgaatcccacttggcttacgaacgattatcagaagcgtattttggac 2282
Query: 361 aagctatggtatatatcacctacaggtggtcccttcagcggcggaaagcatcaactacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2283 aagctatggtatatatcacctacaggtggtcccttcagcggcggaaagcatcaactacca 2342
Query: 421 catctagcggccacatacgctgctataaattccatcgctctatgtcacaatctcgatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 catctagcggccacatacgctgctataaattccatcgctctatgtcacaatctcgatgat 2402
Query: 481 aacagagaaatcaataaaaaggctatatacgactggctcatttctcttaamacaccta 538
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2403 aacagagaaatcaataaaaaggctatatacgactggctcatttctcttaaaacaccta 2460
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3596
Number of Sequences: 1807
Number of extensions: 3596
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 538
length of database: 10,358,551
effective HSP length: 16
effective length of query: 522
effective length of database: 10,329,639
effective search space: 5392071558
effective search space used: 5392071558
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)